Natural language can steer all-atom protein design across diverse objectives

Prompteina generated protein sequences and structures from textual specifications, outperforming specialized baselines and producing experimentally confirmed binders to GM2A.

Top University
Joseph Lee · Yanjing Li · Bo Qiang · Gregory Lau · Allyson Ettinger · Noah A. Smith · +4 more

University of Washington · National University of Singapore · Allen Institute for AI (Ai2) · Howard Hughes Medical Institute

Research Digest··3 min read
Lee and colleagues developed Prompteina, a model that jointly generates protein sequences and all-atom structures conditioned on natural-language descriptions of desired properties.

4 million captions derived from database annotations, scientific literature and properties computed from structures.

Why this paper

From Allen Institute for AI (Ai2) and 3 others

In one line

Prompteina generates all-atom protein structures from natural language descriptions, outperforming baselines and experimentally validating binders.

What we could check

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  • ✓Reports numbers on named benchmarks

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Research Digest

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